Package: TGST 1.0

TGST: Targeted Gold Standard Testing

Functions for implementing the targeted gold standard (GS) testing. You provide the true disease or treatment failure status and the risk score, tell 'TGST' the availability of GS tests and which method to use, and it returns the optimal tripartite rules. Please refer to Liu et al. (2013) <doi:10.1080/01621459.2013.810149> for more details.

Authors:Yizhen Xu [aut, cre], Tao Liu [aut]

TGST_1.0.tar.gz
TGST_1.0.zip(r-4.5)TGST_1.0.zip(r-4.4)TGST_1.0.zip(r-4.3)
TGST_1.0.tgz(r-4.4-any)TGST_1.0.tgz(r-4.3-any)
TGST_1.0.tar.gz(r-4.5-noble)TGST_1.0.tar.gz(r-4.4-noble)
TGST_1.0.tgz(r-4.4-emscripten)TGST_1.0.tgz(r-4.3-emscripten)
TGST.pdf |TGST.html✨
TGST/json (API)
NEWS

# Install 'TGST' in R:
install.packages('TGST', repos = c('https://yizhenxu.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/yizhenxu/tgst/issues

Datasets:
  • Simdata - Simulated data for package illustration

On CRAN:

3.70 score 183 downloads 17 exports 33 dependencies

Last updated 4 years agofrom:6ee8716eb0. Checks:OK: 1 NOTE: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 10 2024
R-4.5-winNOTENov 10 2024
R-4.5-linuxNOTENov 10 2024
R-4.4-winNOTENov 10 2024
R-4.4-macNOTENov 10 2024
R-4.3-winNOTENov 10 2024
R-4.3-macNOTENov 10 2024

Exports:cal.AUCCheck.exp.tiltCV.TGSTnonpar.fnr.fprnonpar.rulesOpt.nonpar.ruleOpt.semipar.ruleOptimalRuleplotROC.nonparROC.semiparROCAnalysisSemi.par.rulesemipar.fnr.fprsummaryTGSTTGST.summ

Dependencies:clicolorspaceevaluatefansifarverggplot2gluegtablehighrisobandknitrlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalestibbleutf8vctrsviridisLitewithrxfunyaml

Package 'TGST'

Yizhen Xu, Tao Liu

Rendered fromTGST-vignette.Rmdusingknitr::rmarkdownon Nov 10 2024.

Last update: 2020-11-16
Started: 2020-11-13