Package: TGST 1.0

TGST: Targeted Gold Standard Testing

Functions for implementing the targeted gold standard (GS) testing. You provide the true disease or treatment failure status and the risk score, tell 'TGST' the availability of GS tests and which method to use, and it returns the optimal tripartite rules. Please refer to Liu et al. (2013) <doi:10.1080/01621459.2013.810149> for more details.

Authors:Yizhen Xu [aut, cre], Tao Liu [aut]

TGST_1.0.tar.gz
TGST_1.0.zip(r-4.5)TGST_1.0.zip(r-4.4)TGST_1.0.zip(r-4.3)
TGST_1.0.tgz(r-4.5-any)TGST_1.0.tgz(r-4.4-any)TGST_1.0.tgz(r-4.3-any)
TGST_1.0.tar.gz(r-4.5-noble)TGST_1.0.tar.gz(r-4.4-noble)
TGST_1.0.tgz(r-4.4-emscripten)TGST_1.0.tgz(r-4.3-emscripten)
TGST.pdf |TGST.html✨
TGST/json (API)
NEWS

# Install 'TGST' in R:
install.packages('TGST', repos = c('https://yizhenxu.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/yizhenxu/tgst/issues

Datasets:
  • Simdata - Simulated data for package illustration

On CRAN:

Conda:

3.70 score 177 downloads 17 exports 33 dependencies

Last updated 4 years agofrom:6ee8716eb0. Checks:1 OK, 8 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 10 2025
R-4.5-winNOTEMar 10 2025
R-4.5-macNOTEMar 10 2025
R-4.5-linuxNOTEMar 10 2025
R-4.4-winNOTEMar 10 2025
R-4.4-macNOTEMar 10 2025
R-4.4-linuxNOTEMar 10 2025
R-4.3-winNOTEMar 10 2025
R-4.3-macNOTEMar 10 2025

Exports:cal.AUCCheck.exp.tiltCV.TGSTnonpar.fnr.fprnonpar.rulesOpt.nonpar.ruleOpt.semipar.ruleOptimalRuleplotROC.nonparROC.semiparROCAnalysisSemi.par.rulesemipar.fnr.fprsummaryTGSTTGST.summ

Dependencies:clicolorspaceevaluatefansifarverggplot2gluegtablehighrisobandknitrlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalestibbleutf8vctrsviridisLitewithrxfunyaml

Package 'TGST'

Yizhen Xu, Tao Liu

Rendered fromTGST-vignette.Rmdusingknitr::rmarkdownon Mar 10 2025.

Last update: 2020-11-16
Started: 2020-11-13