Package: TGST 1.0

TGST: Targeted Gold Standard Testing

Functions for implementing the targeted gold standard (GS) testing. You provide the true disease or treatment failure status and the risk score, tell 'TGST' the availability of GS tests and which method to use, and it returns the optimal tripartite rules. Please refer to Liu et al. (2013) <doi:10.1080/01621459.2013.810149> for more details.

Authors:Yizhen Xu [aut, cre], Tao Liu [aut]

TGST_1.0.tar.gz
TGST_1.0.zip(r-4.5)TGST_1.0.zip(r-4.4)TGST_1.0.zip(r-4.3)
TGST_1.0.tgz(r-4.4-any)TGST_1.0.tgz(r-4.3-any)
TGST_1.0.tar.gz(r-4.5-noble)TGST_1.0.tar.gz(r-4.4-noble)
TGST_1.0.tgz(r-4.4-emscripten)TGST_1.0.tgz(r-4.3-emscripten)
TGST.pdf |TGST.html✨
TGST/json (API)
NEWS

# Install 'TGST' in R:
install.packages('TGST', repos = c('https://yizhenxu.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/yizhenxu/tgst/issues

Datasets:
  • Simdata - Simulated data for package illustration

On CRAN:

17 exports 0.63 score 33 dependencies 214 downloads

Last updated 4 years agofrom:6ee8716eb0. Checks:OK: 1 NOTE: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 11 2024
R-4.5-winNOTESep 11 2024
R-4.5-linuxNOTESep 11 2024
R-4.4-winNOTESep 11 2024
R-4.4-macNOTESep 11 2024
R-4.3-winNOTESep 11 2024
R-4.3-macNOTESep 11 2024

Exports:cal.AUCCheck.exp.tiltCV.TGSTnonpar.fnr.fprnonpar.rulesOpt.nonpar.ruleOpt.semipar.ruleOptimalRuleplotROC.nonparROC.semiparROCAnalysisSemi.par.rulesemipar.fnr.fprsummaryTGSTTGST.summ

Dependencies:clicolorspaceevaluatefansifarverggplot2gluegtablehighrisobandknitrlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalestibbleutf8vctrsviridisLitewithrxfunyaml

Package 'TGST'

Yizhen Xu, Tao Liu

Rendered fromTGST-vignette.Rmdusingknitr::rmarkdownon Sep 11 2024.

Last update: 2020-11-16
Started: 2020-11-13