Package: TGST 1.0

TGST: Targeted Gold Standard Testing

Functions for implementing the targeted gold standard (GS) testing. You provide the true disease or treatment failure status and the risk score, tell 'TGST' the availability of GS tests and which method to use, and it returns the optimal tripartite rules. Please refer to Liu et al. (2013) <doi:10.1080/01621459.2013.810149> for more details.

Authors:Yizhen Xu [aut, cre], Tao Liu [aut]

TGST_1.0.tar.gz
TGST_1.0.zip(r-4.5)TGST_1.0.zip(r-4.4)TGST_1.0.zip(r-4.3)
TGST_1.0.tgz(r-4.5-any)TGST_1.0.tgz(r-4.4-any)TGST_1.0.tgz(r-4.3-any)
TGST_1.0.tar.gz(r-4.5-noble)TGST_1.0.tar.gz(r-4.4-noble)
TGST_1.0.tgz(r-4.4-emscripten)TGST_1.0.tgz(r-4.3-emscripten)
TGST.pdf |TGST.html✨
TGST/json (API)
NEWS

# Install 'TGST' in R:
install.packages('TGST', repos = c('https://yizhenxu.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/yizhenxu/tgst/issues

Datasets:
  • Simdata - Simulated data for package illustration

On CRAN:

3.70 score 166 downloads 17 exports 33 dependencies

Last updated 4 years agofrom:6ee8716eb0. Checks:1 OK, 7 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 08 2025
R-4.5-winNOTEFeb 08 2025
R-4.5-macNOTEFeb 08 2025
R-4.5-linuxNOTEFeb 08 2025
R-4.4-winNOTEFeb 09 2025
R-4.4-macNOTEFeb 08 2025
R-4.3-winNOTEFeb 09 2025
R-4.3-macNOTEFeb 08 2025

Exports:cal.AUCCheck.exp.tiltCV.TGSTnonpar.fnr.fprnonpar.rulesOpt.nonpar.ruleOpt.semipar.ruleOptimalRuleplotROC.nonparROC.semiparROCAnalysisSemi.par.rulesemipar.fnr.fprsummaryTGSTTGST.summ

Dependencies:clicolorspaceevaluatefansifarverggplot2gluegtablehighrisobandknitrlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalestibbleutf8vctrsviridisLitewithrxfunyaml

Package 'TGST'

Yizhen Xu, Tao Liu

Rendered fromTGST-vignette.Rmdusingknitr::rmarkdownon Feb 08 2025.

Last update: 2020-11-16
Started: 2020-11-13